Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afb2S4R1M3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afb2S4R1M3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
H2afb2S4R1M3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.6■■□□□ 1.05
H2afb2S4R1M3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
H2afb2S4R1M3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afb2S4R1M3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
H2afb2S4R1M3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afb2S4R1M3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
H2afb2S4R1M3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
H2afb2S4R1M3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
H2afb2S4R1M3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
H2afb2S4R1M3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
H2afb2S4R1M3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afb2S4R1M3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
H2afb2S4R1M3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.54■■□□□ 1.04
H2afb2S4R1M3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb2S4R1M3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb2S4R1M3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.53■■□□□ 1.04
H2afb2S4R1M3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb2S4R1M3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
H2afb2S4R1M3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afb2S4R1M3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afb2S4R1M3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
H2afb2S4R1M3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.52■■□□□ 1.04
H2afb2S4R1M3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.51■■□□□ 1.03
H2afb2S4R1M3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
H2afb2S4R1M3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.51■■□□□ 1.03
H2afb2S4R1M3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afb2S4R1M3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afb2S4R1M3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2afb2S4R1M3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2afb2S4R1M3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2afb2S4R1M3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2afb2S4R1M3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.49■■□□□ 1.03
H2afb2S4R1M3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.49■■□□□ 1.03
H2afb2S4R1M3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms