Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ClcnkaQ9WUB7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ClcnkaQ9WUB7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ClcnkaQ9WUB7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ClcnkaQ9WUB7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ClcnkaQ9WUB7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClcnkaQ9WUB7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClcnkaQ9WUB7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Cap2-205ENSMUST00000225824 1634 ntBASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClcnkaQ9WUB7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ClcnkaQ9WUB7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClcnkaQ9WUB7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClcnkaQ9WUB7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
ClcnkaQ9WUB7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ClcnkaQ9WUB7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.76■□□□□ 0.75
ClcnkaQ9WUB7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClcnkaQ9WUB7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClcnkaQ9WUB7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ClcnkaQ9WUB7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClcnkaQ9WUB7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ClcnkaQ9WUB7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClcnkaQ9WUB7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Gm22567-201ENSMUST00000175542 342 ntBASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ClcnkaQ9WUB7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ClcnkaQ9WUB7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ClcnkaQ9WUB7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms