Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SrfQ9JM73 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SrfQ9JM73 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SrfQ9JM73 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SrfQ9JM73 Gm12821-201ENSMUST00000120022 600 ntBASIC20.69■□□□□ 0.9
SrfQ9JM73 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.69■□□□□ 0.9
SrfQ9JM73 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SrfQ9JM73 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SrfQ9JM73 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
SrfQ9JM73 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.68■□□□□ 0.9
SrfQ9JM73 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.68■□□□□ 0.9
SrfQ9JM73 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SrfQ9JM73 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SrfQ9JM73 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SrfQ9JM73 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SrfQ9JM73 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.67■□□□□ 0.9
SrfQ9JM73 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SrfQ9JM73 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SrfQ9JM73 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.67■□□□□ 0.9
SrfQ9JM73 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SrfQ9JM73 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SrfQ9JM73 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.66■□□□□ 0.9
SrfQ9JM73 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SrfQ9JM73 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.65■□□□□ 0.9
SrfQ9JM73 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.65■□□□□ 0.9
SrfQ9JM73 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SrfQ9JM73 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SrfQ9JM73 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SrfQ9JM73 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.64■□□□□ 0.89
SrfQ9JM73 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SrfQ9JM73 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SrfQ9JM73 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.63■□□□□ 0.89
SrfQ9JM73 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SrfQ9JM73 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SrfQ9JM73 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.62■□□□□ 0.89
SrfQ9JM73 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SrfQ9JM73 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SrfQ9JM73 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SrfQ9JM73 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SrfQ9JM73 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SrfQ9JM73 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.61■□□□□ 0.89
SrfQ9JM73 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SrfQ9JM73 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.61■□□□□ 0.89
SrfQ9JM73 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SrfQ9JM73 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SrfQ9JM73 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.61■□□□□ 0.89
SrfQ9JM73 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.6■□□□□ 0.89
SrfQ9JM73 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.6■□□□□ 0.89
SrfQ9JM73 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.6■□□□□ 0.89
SrfQ9JM73 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SrfQ9JM73 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SrfQ9JM73 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SrfQ9JM73 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SrfQ9JM73 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SrfQ9JM73 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
SrfQ9JM73 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SrfQ9JM73 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SrfQ9JM73 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SrfQ9JM73 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SrfQ9JM73 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SrfQ9JM73 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SrfQ9JM73 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
SrfQ9JM73 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SrfQ9JM73 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.56■□□□□ 0.88
SrfQ9JM73 Golgb1-201ENSMUST00000023534 498 ntBASIC20.56■□□□□ 0.88
SrfQ9JM73 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SrfQ9JM73 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.56■□□□□ 0.88
SrfQ9JM73 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SrfQ9JM73 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SrfQ9JM73 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SrfQ9JM73 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.55■□□□□ 0.88
SrfQ9JM73 Serp2-204ENSMUST00000228055 705 ntBASIC20.55■□□□□ 0.88
SrfQ9JM73 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SrfQ9JM73 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SrfQ9JM73 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SrfQ9JM73 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SrfQ9JM73 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SrfQ9JM73 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SrfQ9JM73 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.54■□□□□ 0.88
SrfQ9JM73 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SrfQ9JM73 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.54■□□□□ 0.88
SrfQ9JM73 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.54■□□□□ 0.88
SrfQ9JM73 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SrfQ9JM73 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 601 ms