Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Herpud2Q9JJC9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herpud2Q9JJC9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Herpud2Q9JJC9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herpud2Q9JJC9 Gm40881-201ENSMUST00000223397 166 ntBASIC21.73■■□□□ 1.07
Herpud2Q9JJC9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Herpud2Q9JJC9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Herpud2Q9JJC9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Herpud2Q9JJC9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Herpud2Q9JJC9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Herpud2Q9JJC9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herpud2Q9JJC9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Herpud2Q9JJC9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.7■■□□□ 1.06
Herpud2Q9JJC9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Herpud2Q9JJC9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.69■■□□□ 1.06
Herpud2Q9JJC9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Herpud2Q9JJC9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.69■■□□□ 1.06
Herpud2Q9JJC9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Herpud2Q9JJC9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.68■■□□□ 1.06
Herpud2Q9JJC9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.68■■□□□ 1.06
Herpud2Q9JJC9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.68■■□□□ 1.06
Herpud2Q9JJC9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Herpud2Q9JJC9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Herpud2Q9JJC9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Herpud2Q9JJC9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herpud2Q9JJC9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Herpud2Q9JJC9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.67■■□□□ 1.06
Herpud2Q9JJC9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Herpud2Q9JJC9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Herpud2Q9JJC9 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.64■■□□□ 1.06
Herpud2Q9JJC9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Herpud2Q9JJC9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.64■■□□□ 1.05
Herpud2Q9JJC9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.64■■□□□ 1.05
Herpud2Q9JJC9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Herpud2Q9JJC9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Herpud2Q9JJC9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Herpud2Q9JJC9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Herpud2Q9JJC9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Herpud2Q9JJC9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
Herpud2Q9JJC9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Herpud2Q9JJC9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.61■■□□□ 1.05
Herpud2Q9JJC9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Herpud2Q9JJC9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Herpud2Q9JJC9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Herpud2Q9JJC9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Gm22238-201ENSMUST00000175222 88 ntBASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Herpud2Q9JJC9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Herpud2Q9JJC9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Herpud2Q9JJC9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Herpud2Q9JJC9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Herpud2Q9JJC9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.58■■□□□ 1.05
Herpud2Q9JJC9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.58■■□□□ 1.05
Herpud2Q9JJC9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms