Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chaf1bQ9D0N7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chaf1bQ9D0N7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chaf1bQ9D0N7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1bQ9D0N7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1bQ9D0N7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chaf1bQ9D0N7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.18■□□□□ 0.82
Chaf1bQ9D0N7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.17■□□□□ 0.82
Chaf1bQ9D0N7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chaf1bQ9D0N7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Chaf1bQ9D0N7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chaf1bQ9D0N7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chaf1bQ9D0N7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1bQ9D0N7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1bQ9D0N7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chaf1bQ9D0N7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chaf1bQ9D0N7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chaf1bQ9D0N7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chaf1bQ9D0N7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Gm9812-201ENSMUST00000061934 968 ntBASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.11■□□□□ 0.81
Chaf1bQ9D0N7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chaf1bQ9D0N7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Chaf1bQ9D0N7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.08■□□□□ 0.81
Chaf1bQ9D0N7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chaf1bQ9D0N7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chaf1bQ9D0N7 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.08■□□□□ 0.81
Chaf1bQ9D0N7 Gm22567-201ENSMUST00000175542 342 ntBASIC20.08■□□□□ 0.81
Chaf1bQ9D0N7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Chaf1bQ9D0N7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms