Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkiras2Q9CR56 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkiras2Q9CR56 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkiras2Q9CR56 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Gm9806-201ENSMUST00000051080 552 ntBASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nkiras2Q9CR56 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Scarna2-201ENSMUST00000157560 414 ntBASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Nkiras2Q9CR56 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkiras2Q9CR56 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkiras2Q9CR56 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkiras2Q9CR56 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkiras2Q9CR56 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.27■□□□□ 0.67
Nkiras2Q9CR56 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkiras2Q9CR56 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkiras2Q9CR56 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkiras2Q9CR56 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkiras2Q9CR56 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkiras2Q9CR56 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Gm11687-201ENSMUST00000118911 886 ntBASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkiras2Q9CR56 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkiras2Q9CR56 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Gm11175-201ENSMUST00000116172 543 ntBASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nkiras2Q9CR56 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Gm16437-201ENSMUST00000025669 507 ntBASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkiras2Q9CR56 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Mir6538-201ENSMUST00000183713 110 ntBASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkiras2Q9CR56 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkiras2Q9CR56 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkiras2Q9CR56 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms