Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl39lQ9CQD0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Rpl39lQ9CQD0 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.08□□□□□ -0.15
Rpl39lQ9CQD0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39lQ9CQD0 Gm24804-201ENSMUST00000174982 85 ntBASIC14.08□□□□□ -0.16
Rpl39lQ9CQD0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rpl39lQ9CQD0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39lQ9CQD0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl39lQ9CQD0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl39lQ9CQD0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl39lQ9CQD0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpl39lQ9CQD0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpl39lQ9CQD0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpl39lQ9CQD0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39lQ9CQD0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rpl39lQ9CQD0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpl39lQ9CQD0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpl39lQ9CQD0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpl39lQ9CQD0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpl39lQ9CQD0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39lQ9CQD0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39lQ9CQD0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpl39lQ9CQD0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpl39lQ9CQD0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpl39lQ9CQD0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39lQ9CQD0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39lQ9CQD0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl39lQ9CQD0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpl39lQ9CQD0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39lQ9CQD0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl39lQ9CQD0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rpl39lQ9CQD0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rpl39lQ9CQD0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl39lQ9CQD0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl39lQ9CQD0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms