Protein–RNA interactions for Protein: Q99KN9

Clint1, Clathrin interactor 1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clint1Q99KN9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clint1Q99KN9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clint1Q99KN9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Clint1Q99KN9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clint1Q99KN9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clint1Q99KN9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clint1Q99KN9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clint1Q99KN9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clint1Q99KN9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.45■□□□□ 0.7
Clint1Q99KN9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Clint1Q99KN9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
Clint1Q99KN9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clint1Q99KN9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.43■□□□□ 0.7
Clint1Q99KN9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clint1Q99KN9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clint1Q99KN9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clint1Q99KN9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clint1Q99KN9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clint1Q99KN9 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.41■□□□□ 0.7
Clint1Q99KN9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Clint1Q99KN9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clint1Q99KN9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clint1Q99KN9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.4■□□□□ 0.7
Clint1Q99KN9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clint1Q99KN9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clint1Q99KN9 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.39■□□□□ 0.7
Clint1Q99KN9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.39■□□□□ 0.69
Clint1Q99KN9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clint1Q99KN9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clint1Q99KN9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clint1Q99KN9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clint1Q99KN9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Clint1Q99KN9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.36■□□□□ 0.69
Clint1Q99KN9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clint1Q99KN9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.36■□□□□ 0.69
Clint1Q99KN9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Clint1Q99KN9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clint1Q99KN9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clint1Q99KN9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.35■□□□□ 0.69
Clint1Q99KN9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.35■□□□□ 0.69
Clint1Q99KN9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clint1Q99KN9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clint1Q99KN9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.34■□□□□ 0.69
Clint1Q99KN9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.34■□□□□ 0.69
Clint1Q99KN9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.33■□□□□ 0.69
Clint1Q99KN9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clint1Q99KN9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.33■□□□□ 0.68
Clint1Q99KN9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms