Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp1aQ921W0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1aQ921W0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp1aQ921W0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chmp1aQ921W0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp1aQ921W0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1aQ921W0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Chmp1aQ921W0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1aQ921W0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1aQ921W0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1aQ921W0 Gm22567-201ENSMUST00000175542 342 ntBASIC18.92■□□□□ 0.62
Chmp1aQ921W0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1aQ921W0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Chmp1aQ921W0 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.92■□□□□ 0.62
Chmp1aQ921W0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1aQ921W0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp1aQ921W0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp1aQ921W0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp1aQ921W0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Gm4799-201ENSMUST00000095396 657 ntBASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp1aQ921W0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp1aQ921W0 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.87■□□□□ 0.61
Chmp1aQ921W0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Gm6821-201ENSMUST00000107540 542 ntBASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp1aQ921W0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp1aQ921W0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.84■□□□□ 0.61
Chmp1aQ921W0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp1aQ921W0 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.83■□□□□ 0.6
Chmp1aQ921W0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms