Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc44a3Q921V7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc44a3Q921V7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc44a3Q921V7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc44a3Q921V7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc44a3Q921V7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.34■■□□□ 1.01
Slc44a3Q921V7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc44a3Q921V7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc44a3Q921V7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc44a3Q921V7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc44a3Q921V7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc44a3Q921V7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.33■■□□□ 1.01
Slc44a3Q921V7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Slc44a3Q921V7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc44a3Q921V7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Slc44a3Q921V7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc44a3Q921V7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
Slc44a3Q921V7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.32■■□□□ 1
Slc44a3Q921V7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.32■■□□□ 1
Slc44a3Q921V7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc44a3Q921V7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc44a3Q921V7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc44a3Q921V7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc44a3Q921V7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Slc44a3Q921V7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Slc44a3Q921V7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc44a3Q921V7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc44a3Q921V7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc44a3Q921V7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc44a3Q921V7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc44a3Q921V7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a3Q921V7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc44a3Q921V7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.28■■□□□ 1
Slc44a3Q921V7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc44a3Q921V7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc44a3Q921V7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Slc44a3Q921V7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.28■■□□□ 1
Slc44a3Q921V7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.27■■□□□ 1
Slc44a3Q921V7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.27■■□□□ 1
Slc44a3Q921V7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc44a3Q921V7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Slc44a3Q921V7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a3Q921V7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.26■□□□□ 0.99
Slc44a3Q921V7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a3Q921V7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc44a3Q921V7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc44a3Q921V7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc44a3Q921V7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc44a3Q921V7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Slc44a3Q921V7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.22■□□□□ 0.99
Slc44a3Q921V7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms