Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb13Q91Y06 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb13Q91Y06 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb13Q91Y06 Mir6538-201ENSMUST00000183713 110 ntBASIC21.76■■□□□ 1.07
Pcdhb13Q91Y06 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb13Q91Y06 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb13Q91Y06 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb13Q91Y06 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb13Q91Y06 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb13Q91Y06 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb13Q91Y06 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Gm7332-201ENSMUST00000118351 454 ntBASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb13Q91Y06 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb13Q91Y06 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb13Q91Y06 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb13Q91Y06 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdhb13Q91Y06 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb13Q91Y06 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb13Q91Y06 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhb13Q91Y06 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhb13Q91Y06 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhb13Q91Y06 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb13Q91Y06 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Gm12366-201ENSMUST00000121722 873 ntBASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Gm5786-201ENSMUST00000085368 882 ntBASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb13Q91Y06 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb13Q91Y06 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb13Q91Y06 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.66■■□□□ 1.06
Pcdhb13Q91Y06 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb13Q91Y06 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb13Q91Y06 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb13Q91Y06 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhb13Q91Y06 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb13Q91Y06 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb13Q91Y06 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb13Q91Y06 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms