Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb5Q91XZ5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb5Q91XZ5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb5Q91XZ5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Gm40881-201ENSMUST00000223397 166 ntBASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb5Q91XZ5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Pcdhb5Q91XZ5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb5Q91XZ5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Pcdhb5Q91XZ5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Pcdhb5Q91XZ5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb5Q91XZ5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.7■■□□□ 1.7
Pcdhb5Q91XZ5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb5Q91XZ5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb5Q91XZ5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.69■■□□□ 1.7
Pcdhb5Q91XZ5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.69■■□□□ 1.7
Pcdhb5Q91XZ5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.69■■□□□ 1.7
Pcdhb5Q91XZ5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb5Q91XZ5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb5Q91XZ5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb5Q91XZ5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb5Q91XZ5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb5Q91XZ5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb5Q91XZ5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb5Q91XZ5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb5Q91XZ5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb5Q91XZ5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.66■■□□□ 1.7
Pcdhb5Q91XZ5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Pcdhb5Q91XZ5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb5Q91XZ5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Pcdhb5Q91XZ5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb5Q91XZ5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb5Q91XZ5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb5Q91XZ5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb5Q91XZ5 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.64■■□□□ 1.69
Pcdhb5Q91XZ5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb5Q91XZ5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Gm22238-201ENSMUST00000175222 88 ntBASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Gm10399-202ENSMUST00000202768 748 ntBASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb5Q91XZ5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.62■■□□□ 1.69
Pcdhb5Q91XZ5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.62■■□□□ 1.69
Pcdhb5Q91XZ5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb5Q91XZ5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb5Q91XZ5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb5Q91XZ5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb5Q91XZ5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb5Q91XZ5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb5Q91XZ5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb5Q91XZ5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb5Q91XZ5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb5Q91XZ5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb5Q91XZ5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb5Q91XZ5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Pcdhb5Q91XZ5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb5Q91XZ5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb5Q91XZ5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.57■■□□□ 1.68
Pcdhb5Q91XZ5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Pcdhb5Q91XZ5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb5Q91XZ5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Pcdhb5Q91XZ5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb5Q91XZ5 Gm13241-201ENSMUST00000094493 780 ntBASIC25.56■■□□□ 1.68
Pcdhb5Q91XZ5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms