Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga4Q91XY4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga4Q91XY4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga4Q91XY4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga4Q91XY4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhga4Q91XY4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga4Q91XY4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga4Q91XY4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga4Q91XY4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga4Q91XY4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhga4Q91XY4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga4Q91XY4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga4Q91XY4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Pcdhga4Q91XY4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhga4Q91XY4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga4Q91XY4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga4Q91XY4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga4Q91XY4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga4Q91XY4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga4Q91XY4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21■□□□□ 0.95
Pcdhga4Q91XY4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga4Q91XY4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Gm45444-201ENSMUST00000211394 898 ntBASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhga4Q91XY4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga4Q91XY4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Gm43566-201ENSMUST00000196851 808 ntBASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhga4Q91XY4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms