Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vopp1Q8R1C3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vopp1Q8R1C3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vopp1Q8R1C3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.52■■□□□ 1.36
Vopp1Q8R1C3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vopp1Q8R1C3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Vopp1Q8R1C3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vopp1Q8R1C3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vopp1Q8R1C3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Vopp1Q8R1C3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vopp1Q8R1C3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.49■■□□□ 1.35
Vopp1Q8R1C3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vopp1Q8R1C3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.49■■□□□ 1.35
Vopp1Q8R1C3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vopp1Q8R1C3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Vopp1Q8R1C3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vopp1Q8R1C3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Vopp1Q8R1C3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.48■■□□□ 1.35
Vopp1Q8R1C3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 Etf1-202ENSMUST00000180351 108 ntBASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Vopp1Q8R1C3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vopp1Q8R1C3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.46■■□□□ 1.35
Vopp1Q8R1C3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vopp1Q8R1C3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vopp1Q8R1C3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vopp1Q8R1C3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.45■■□□□ 1.35
Vopp1Q8R1C3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Vopp1Q8R1C3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vopp1Q8R1C3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vopp1Q8R1C3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vopp1Q8R1C3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vopp1Q8R1C3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
Vopp1Q8R1C3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vopp1Q8R1C3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vopp1Q8R1C3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vopp1Q8R1C3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Vopp1Q8R1C3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Vopp1Q8R1C3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vopp1Q8R1C3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Vopp1Q8R1C3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.38■■□□□ 1.33
Vopp1Q8R1C3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Vopp1Q8R1C3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Vopp1Q8R1C3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Vopp1Q8R1C3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Vopp1Q8R1C3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Vopp1Q8R1C3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vopp1Q8R1C3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms