Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.57■■□□□ 1.68
Usp44Q8C2S0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Usp44Q8C2S0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.56■■□□□ 1.68
Usp44Q8C2S0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp44Q8C2S0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp44Q8C2S0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp44Q8C2S0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp44Q8C2S0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Usp44Q8C2S0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp44Q8C2S0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
Usp44Q8C2S0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Usp44Q8C2S0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp44Q8C2S0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp44Q8C2S0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp44Q8C2S0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Usp44Q8C2S0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.5■■□□□ 1.67
Usp44Q8C2S0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Usp44Q8C2S0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Usp44Q8C2S0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.49■■□□□ 1.67
Usp44Q8C2S0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.49■■□□□ 1.67
Usp44Q8C2S0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Usp44Q8C2S0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Usp44Q8C2S0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Usp44Q8C2S0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp44Q8C2S0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp44Q8C2S0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp44Q8C2S0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp44Q8C2S0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.47■■□□□ 1.67
Usp44Q8C2S0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Usp44Q8C2S0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Usp44Q8C2S0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Usp44Q8C2S0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Usp44Q8C2S0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Usp44Q8C2S0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Usp44Q8C2S0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Usp44Q8C2S0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.45■■□□□ 1.66
Usp44Q8C2S0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Usp44Q8C2S0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Usp44Q8C2S0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Usp44Q8C2S0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp44Q8C2S0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.43■■□□□ 1.66
Usp44Q8C2S0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Usp44Q8C2S0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Usp44Q8C2S0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Usp44Q8C2S0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Usp44Q8C2S0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp44Q8C2S0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp44Q8C2S0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Usp44Q8C2S0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp44Q8C2S0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp44Q8C2S0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms