Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smco3Q8BQM7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Gm37136-201ENSMUST00000194368 194 ntBASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smco3Q8BQM7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smco3Q8BQM7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smco3Q8BQM7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smco3Q8BQM7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smco3Q8BQM7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.67■□□□□ 0.42
Smco3Q8BQM7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smco3Q8BQM7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco3Q8BQM7 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.65■□□□□ 0.42
Smco3Q8BQM7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco3Q8BQM7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco3Q8BQM7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smco3Q8BQM7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smco3Q8BQM7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco3Q8BQM7 Nkain2-201ENSMUST00000092602 558 ntBASIC17.64■□□□□ 0.41
Smco3Q8BQM7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco3Q8BQM7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco3Q8BQM7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smco3Q8BQM7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smco3Q8BQM7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smco3Q8BQM7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smco3Q8BQM7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smco3Q8BQM7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smco3Q8BQM7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Smco3Q8BQM7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smco3Q8BQM7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smco3Q8BQM7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smco3Q8BQM7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smco3Q8BQM7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smco3Q8BQM7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smco3Q8BQM7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms