Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim36Q80WG7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim36Q80WG7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim36Q80WG7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim36Q80WG7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim36Q80WG7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim36Q80WG7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim36Q80WG7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim36Q80WG7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim36Q80WG7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim36Q80WG7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.69■□□□□ 0.9
Trim36Q80WG7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim36Q80WG7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.68■□□□□ 0.9
Trim36Q80WG7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim36Q80WG7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.68■□□□□ 0.9
Trim36Q80WG7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim36Q80WG7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Trim36Q80WG7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.67■□□□□ 0.9
Trim36Q80WG7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim36Q80WG7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim36Q80WG7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim36Q80WG7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim36Q80WG7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim36Q80WG7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim36Q80WG7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.65■□□□□ 0.9
Trim36Q80WG7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim36Q80WG7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim36Q80WG7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim36Q80WG7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim36Q80WG7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim36Q80WG7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trim36Q80WG7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim36Q80WG7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim36Q80WG7 Terc-201ENSMUST00000082862 423 ntBASIC20.64■□□□□ 0.89
Trim36Q80WG7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim36Q80WG7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim36Q80WG7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim36Q80WG7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim36Q80WG7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim36Q80WG7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim36Q80WG7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.62■□□□□ 0.89
Trim36Q80WG7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim36Q80WG7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim36Q80WG7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim36Q80WG7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms