Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn4bQ7M729 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn4bQ7M729 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scn4bQ7M729 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Gm7332-201ENSMUST00000118351 454 ntBASIC21.03■□□□□ 0.96
Scn4bQ7M729 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Scn4bQ7M729 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn4bQ7M729 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scn4bQ7M729 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn4bQ7M729 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn4bQ7M729 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn4bQ7M729 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Cap2-205ENSMUST00000225824 1634 ntBASIC21■□□□□ 0.95
Scn4bQ7M729 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Scn4bQ7M729 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn4bQ7M729 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn4bQ7M729 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn4bQ7M729 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn4bQ7M729 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn4bQ7M729 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.98■□□□□ 0.95
Scn4bQ7M729 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.98■□□□□ 0.95
Scn4bQ7M729 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn4bQ7M729 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.98■□□□□ 0.95
Scn4bQ7M729 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.97■□□□□ 0.95
Scn4bQ7M729 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn4bQ7M729 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn4bQ7M729 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn4bQ7M729 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Scn4bQ7M729 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Scn4bQ7M729 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.95■□□□□ 0.94
Scn4bQ7M729 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn4bQ7M729 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn4bQ7M729 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Scn4bQ7M729 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scn4bQ7M729 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn4bQ7M729 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn4bQ7M729 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn4bQ7M729 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn4bQ7M729 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scn4bQ7M729 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms