Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubfd1Q78JW9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubfd1Q78JW9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubfd1Q78JW9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubfd1Q78JW9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Ubfd1Q78JW9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Ubfd1Q78JW9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubfd1Q78JW9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubfd1Q78JW9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubfd1Q78JW9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ubfd1Q78JW9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubfd1Q78JW9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.1■□□□□ 0.97
Ubfd1Q78JW9 Gm9959-201ENSMUST00000068277 390 ntBASIC21.1■□□□□ 0.97
Ubfd1Q78JW9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubfd1Q78JW9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubfd1Q78JW9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.09■□□□□ 0.97
Ubfd1Q78JW9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubfd1Q78JW9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.09■□□□□ 0.97
Ubfd1Q78JW9 Gm14117-201ENSMUST00000122417 843 ntBASIC21.08■□□□□ 0.97
Ubfd1Q78JW9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubfd1Q78JW9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubfd1Q78JW9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.08■□□□□ 0.97
Ubfd1Q78JW9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ubfd1Q78JW9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubfd1Q78JW9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubfd1Q78JW9 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubfd1Q78JW9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubfd1Q78JW9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubfd1Q78JW9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Ubfd1Q78JW9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Etf1-202ENSMUST00000180351 108 ntBASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubfd1Q78JW9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ubfd1Q78JW9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ubfd1Q78JW9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubfd1Q78JW9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubfd1Q78JW9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21■□□□□ 0.95
Ubfd1Q78JW9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ubfd1Q78JW9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ubfd1Q78JW9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubfd1Q78JW9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.98■□□□□ 0.95
Ubfd1Q78JW9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms