Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim45Q6PFY8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim45Q6PFY8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim45Q6PFY8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim45Q6PFY8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim45Q6PFY8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim45Q6PFY8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim45Q6PFY8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Trim45Q6PFY8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.25■□□□□ 0.83
Trim45Q6PFY8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim45Q6PFY8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim45Q6PFY8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.25■□□□□ 0.83
Trim45Q6PFY8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim45Q6PFY8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim45Q6PFY8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim45Q6PFY8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim45Q6PFY8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim45Q6PFY8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim45Q6PFY8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim45Q6PFY8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms