Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Scube3Q66PY1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scube3Q66PY1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.72■■□□□ 1.23
Scube3Q66PY1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Scube3Q66PY1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Scube3Q66PY1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Scube3Q66PY1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Scube3Q66PY1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Scube3Q66PY1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Scube3Q66PY1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Gm43566-201ENSMUST00000196851 808 ntBASIC22.69■■□□□ 1.22
Scube3Q66PY1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scube3Q66PY1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scube3Q66PY1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Scube3Q66PY1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scube3Q66PY1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scube3Q66PY1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scube3Q66PY1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scube3Q66PY1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Scube3Q66PY1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.66■■□□□ 1.22
Scube3Q66PY1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.66■■□□□ 1.22
Scube3Q66PY1 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.66■■□□□ 1.22
Scube3Q66PY1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Scube3Q66PY1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scube3Q66PY1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scube3Q66PY1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scube3Q66PY1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.63■■□□□ 1.21
Scube3Q66PY1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scube3Q66PY1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.62■■□□□ 1.21
Scube3Q66PY1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.62■■□□□ 1.21
Scube3Q66PY1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scube3Q66PY1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.62■■□□□ 1.21
Scube3Q66PY1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Scube3Q66PY1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scube3Q66PY1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scube3Q66PY1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scube3Q66PY1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scube3Q66PY1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Scube3Q66PY1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Scube3Q66PY1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scube3Q66PY1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scube3Q66PY1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scube3Q66PY1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scube3Q66PY1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scube3Q66PY1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scube3Q66PY1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Scube3Q66PY1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scube3Q66PY1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scube3Q66PY1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scube3Q66PY1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms