Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm11847-201ENSMUST00000125165 1119 ntBASIC32.29■■■□□ 2.76
Ptch1Q61115 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC32.29■■■□□ 2.76
Ptch1Q61115 Flvcr1-202ENSMUST00000191946 1216 ntBASIC32.28■■■□□ 2.76
Ptch1Q61115 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ptch1Q61115 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Ptch1Q61115 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ptch1Q61115 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ptch1Q61115 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Ptch1Q61115 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ptch1Q61115 Gm8093-201ENSMUST00000128935 1892 ntBASIC32.26■■■□□ 2.75
Ptch1Q61115 Gm18284-201ENSMUST00000172604 624 ntBASIC32.26■■■□□ 2.75
Ptch1Q61115 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Ptch1Q61115 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ptch1Q61115 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ptch1Q61115 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC32.25■■■□□ 2.75
Ptch1Q61115 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Ptch1Q61115 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ptch1Q61115 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ptch1Q61115 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ptch1Q61115 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ptch1Q61115 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Ptch1Q61115 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC32.23■■■□□ 2.75
Ptch1Q61115 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Ptch1Q61115 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ptch1Q61115 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptch1Q61115 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC32.22■■■□□ 2.75
Ptch1Q61115 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptch1Q61115 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC32.21■■■□□ 2.75
Ptch1Q61115 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC32.21■■■□□ 2.75
Ptch1Q61115 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ptch1Q61115 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Ptch1Q61115 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ptch1Q61115 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Ptch1Q61115 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Ptch1Q61115 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ptch1Q61115 AC153524.1-201ENSMUST00000220436 1935 ntBASIC32.19■■■□□ 2.74
Ptch1Q61115 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Ptch1Q61115 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ptch1Q61115 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC32.18■■■□□ 2.74
Ptch1Q61115 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ptch1Q61115 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC32.17■■■□□ 2.74
Ptch1Q61115 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Ptch1Q61115 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ptch1Q61115 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ptch1Q61115 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Ptch1Q61115 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC32.16■■■□□ 2.74
Ptch1Q61115 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC32.16■■■□□ 2.74
Ptch1Q61115 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Ptch1Q61115 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ptch1Q61115 Gm2011-201ENSMUST00000203124 1263 ntBASIC32.15■■■□□ 2.74
Ptch1Q61115 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ptch1Q61115 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
Ptch1Q61115 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ptch1Q61115 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ptch1Q61115 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ptch1Q61115 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.14■■■□□ 2.74
Ptch1Q61115 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ptch1Q61115 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC32.13■■■□□ 2.73
Ptch1Q61115 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC32.13■■■□□ 2.73
Ptch1Q61115 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ptch1Q61115 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ptch1Q61115 AC117245.4-201ENSMUST00000217388 1646 ntBASIC32.12■■■□□ 2.73
Ptch1Q61115 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Ptch1Q61115 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC32.12■■■□□ 2.73
Ptch1Q61115 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC32.12■■■□□ 2.73
Ptch1Q61115 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC32.12■■■□□ 2.73
Ptch1Q61115 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ptch1Q61115 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ptch1Q61115 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ptch1Q61115 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ptch1Q61115 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ptch1Q61115 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ptch1Q61115 Gm29257-201ENSMUST00000186115 639 ntBASIC32.11■■■□□ 2.73
Ptch1Q61115 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ptch1Q61115 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ptch1Q61115 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ptch1Q61115 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Ptch1Q61115 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ptch1Q61115 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.1■■■□□ 2.73
Ptch1Q61115 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ptch1Q61115 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ptch1Q61115 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ptch1Q61115 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ptch1Q61115 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC32.09■■■□□ 2.73
Ptch1Q61115 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ptch1Q61115 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ptch1Q61115 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Ptch1Q61115 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC32.07■■■□□ 2.72
Ptch1Q61115 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ptch1Q61115 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Ptch1Q61115 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Ptch1Q61115 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ptch1Q61115 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ptch1Q61115 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ptch1Q61115 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC32.04■■■□□ 2.72
Ptch1Q61115 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ptch1Q61115 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ptch1Q61115 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ptch1Q61115 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ptch1Q61115 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms