Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r223Q5SSA0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r223Q5SSA0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r223Q5SSA0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Vmn1r223Q5SSA0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Gm11687-201ENSMUST00000118911 886 ntBASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Gm22567-201ENSMUST00000175542 342 ntBASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vmn1r223Q5SSA0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r223Q5SSA0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vmn1r223Q5SSA0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r223Q5SSA0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.65■□□□□ 0.58
Vmn1r223Q5SSA0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vmn1r223Q5SSA0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r223Q5SSA0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r223Q5SSA0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r223Q5SSA0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.62■□□□□ 0.57
Vmn1r223Q5SSA0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r223Q5SSA0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vmn1r223Q5SSA0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r223Q5SSA0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.62■□□□□ 0.57
Vmn1r223Q5SSA0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms