Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5d-4Q5R1F6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav5d-4Q5R1F6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5d-4Q5R1F6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5d-4Q5R1F6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5d-4Q5R1F6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav5d-4Q5R1F6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav5d-4Q5R1F6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav5d-4Q5R1F6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Trav5d-4Q5R1F6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav5d-4Q5R1F6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5d-4Q5R1F6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav5d-4Q5R1F6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5d-4Q5R1F6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5d-4Q5R1F6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5d-4Q5R1F6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5d-4Q5R1F6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5d-4Q5R1F6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5d-4Q5R1F6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.45■□□□□ 0.54
Trav5d-4Q5R1F6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5d-4Q5R1F6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav5d-4Q5R1F6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5d-4Q5R1F6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms