Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q3KNL4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q3KNL4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q3KNL4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q3KNL4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Q3KNL4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q3KNL4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q3KNL4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q3KNL4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Q3KNL4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Q3KNL4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Q3KNL4 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.13■□□□□ 0.97
Q3KNL4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Q3KNL4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Q3KNL4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q3KNL4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Q3KNL4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Q3KNL4 Gm44428-201ENSMUST00000204474 874 ntBASIC21.12■□□□□ 0.97
Q3KNL4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
Q3KNL4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Q3KNL4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q3KNL4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q3KNL4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q3KNL4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Q3KNL4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Q3KNL4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Q3KNL4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Q3KNL4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q3KNL4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Q3KNL4 Scarna2-201ENSMUST00000157560 414 ntBASIC21.09■□□□□ 0.97
Q3KNL4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.09■□□□□ 0.97
Q3KNL4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.09■□□□□ 0.97
Q3KNL4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q3KNL4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Q3KNL4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.08■□□□□ 0.97
Q3KNL4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Q3KNL4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Q3KNL4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Q3KNL4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q3KNL4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q3KNL4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Q3KNL4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.07■□□□□ 0.96
Q3KNL4 Gm9806-201ENSMUST00000051080 552 ntBASIC21.07■□□□□ 0.96
Q3KNL4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Q3KNL4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Q3KNL4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q3KNL4 Gm16437-201ENSMUST00000025669 507 ntBASIC21.06■□□□□ 0.96
Q3KNL4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Q3KNL4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q3KNL4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q3KNL4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Q3KNL4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Q3KNL4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Q3KNL4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.04■□□□□ 0.96
Q3KNL4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Q3KNL4 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.03■□□□□ 0.96
Q3KNL4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q3KNL4 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.03■□□□□ 0.96
Q3KNL4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.03■□□□□ 0.96
Q3KNL4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Q3KNL4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Q3KNL4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.02■□□□□ 0.96
Q3KNL4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q3KNL4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q3KNL4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q3KNL4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.02■□□□□ 0.96
Q3KNL4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Q3KNL4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q3KNL4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.02■□□□□ 0.96
Q3KNL4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Q3KNL4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Q3KNL4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q3KNL4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Q3KNL4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
Q3KNL4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Q3KNL4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q3KNL4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.01■□□□□ 0.95
Q3KNL4 Gm11687-201ENSMUST00000118911 886 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms