Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20■□□□□ 0.79
Emx1Q04742 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20■□□□□ 0.79
Emx1Q04742 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.99■□□□□ 0.79
Emx1Q04742 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Emx1Q04742 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Emx1Q04742 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Emx1Q04742 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Emx1Q04742 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Emx1Q04742 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Emx1Q04742 Mir3960-201ENSMUST00000198213 73 ntBASIC19.98■□□□□ 0.79
Emx1Q04742 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
Emx1Q04742 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Gm16437-201ENSMUST00000025669 507 ntBASIC19.97■□□□□ 0.79
Emx1Q04742 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Emx1Q04742 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Emx1Q04742 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.96■□□□□ 0.79
Emx1Q04742 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Emx1Q04742 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.95■□□□□ 0.78
Emx1Q04742 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Emx1Q04742 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.95■□□□□ 0.78
Emx1Q04742 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.95■□□□□ 0.78
Emx1Q04742 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Emx1Q04742 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Emx1Q04742 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Emx1Q04742 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Emx1Q04742 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Emx1Q04742 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Emx1Q04742 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Emx1Q04742 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Emx1Q04742 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.93■□□□□ 0.78
Emx1Q04742 Gm12366-201ENSMUST00000121722 873 ntBASIC19.93■□□□□ 0.78
Emx1Q04742 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.93■□□□□ 0.78
Emx1Q04742 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.93■□□□□ 0.78
Emx1Q04742 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.93■□□□□ 0.78
Emx1Q04742 Gm5786-201ENSMUST00000085368 882 ntBASIC19.93■□□□□ 0.78
Emx1Q04742 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Emx1Q04742 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Emx1Q04742 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Emx1Q04742 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Emx1Q04742 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Emx1Q04742 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Emx1Q04742 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.91■□□□□ 0.78
Emx1Q04742 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Emx1Q04742 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Gm37136-201ENSMUST00000194368 194 ntBASIC19.9■□□□□ 0.78
Emx1Q04742 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.9■□□□□ 0.78
Emx1Q04742 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Emx1Q04742 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Emx1Q04742 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.89■□□□□ 0.77
Emx1Q04742 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Emx1Q04742 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Emx1Q04742 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Emx1Q04742 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Emx1Q04742 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Emx1Q04742 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Emx1Q04742 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.88■□□□□ 0.77
Emx1Q04742 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Emx1Q04742 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.87■□□□□ 0.77
Emx1Q04742 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Emx1Q04742 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Emx1Q04742 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms