Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx6P54823 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.2■■□□□ 1.14
Ddx6P54823 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx6P54823 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.2■■□□□ 1.14
Ddx6P54823 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx6P54823 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx6P54823 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx6P54823 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx6P54823 Gm40881-201ENSMUST00000223397 166 ntBASIC22.19■■□□□ 1.14
Ddx6P54823 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx6P54823 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.19■■□□□ 1.14
Ddx6P54823 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx6P54823 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx6P54823 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx6P54823 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx6P54823 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ddx6P54823 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx6P54823 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx6P54823 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx6P54823 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.17■■□□□ 1.14
Ddx6P54823 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.17■■□□□ 1.14
Ddx6P54823 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx6P54823 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Ddx6P54823 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.16■■□□□ 1.14
Ddx6P54823 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx6P54823 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx6P54823 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx6P54823 Gm10399-202ENSMUST00000202768 748 ntBASIC22.16■■□□□ 1.14
Ddx6P54823 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.16■■□□□ 1.14
Ddx6P54823 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx6P54823 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx6P54823 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx6P54823 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ddx6P54823 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx6P54823 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.14■■□□□ 1.13
Ddx6P54823 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.14■■□□□ 1.13
Ddx6P54823 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.14■■□□□ 1.13
Ddx6P54823 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.14■■□□□ 1.13
Ddx6P54823 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx6P54823 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Ddx6P54823 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx6P54823 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx6P54823 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx6P54823 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx6P54823 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.11■■□□□ 1.13
Ddx6P54823 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ddx6P54823 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.1■■□□□ 1.13
Ddx6P54823 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.1■■□□□ 1.13
Ddx6P54823 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx6P54823 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx6P54823 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.09■■□□□ 1.13
Ddx6P54823 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ddx6P54823 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx6P54823 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx6P54823 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx6P54823 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx6P54823 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx6P54823 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.08■■□□□ 1.13
Ddx6P54823 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.08■■□□□ 1.13
Ddx6P54823 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx6P54823 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx6P54823 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.07■■□□□ 1.12
Ddx6P54823 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx6P54823 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx6P54823 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx6P54823 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx6P54823 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ddx6P54823 Gm22238-201ENSMUST00000175222 88 ntBASIC22.05■■□□□ 1.12
Ddx6P54823 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx6P54823 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx6P54823 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx6P54823 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx6P54823 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx6P54823 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx6P54823 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx6P54823 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ddx6P54823 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx6P54823 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.03■■□□□ 1.12
Ddx6P54823 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.03■■□□□ 1.12
Ddx6P54823 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx6P54823 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.03■■□□□ 1.12
Ddx6P54823 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx6P54823 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms