Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.4■■□□□ 1.02
Pdx1P52946 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Pdx1P52946 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pdx1P52946 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pdx1P52946 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pdx1P52946 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.39■■□□□ 1.01
Pdx1P52946 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdx1P52946 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdx1P52946 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Pdx1P52946 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.38■■□□□ 1.01
Pdx1P52946 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdx1P52946 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdx1P52946 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pdx1P52946 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdx1P52946 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pdx1P52946 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pdx1P52946 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdx1P52946 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdx1P52946 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdx1P52946 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pdx1P52946 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.35■■□□□ 1.01
Pdx1P52946 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdx1P52946 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdx1P52946 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdx1P52946 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.34■■□□□ 1.01
Pdx1P52946 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pdx1P52946 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdx1P52946 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdx1P52946 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdx1P52946 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdx1P52946 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Pdx1P52946 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.33■■□□□ 1.01
Pdx1P52946 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdx1P52946 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.33■■□□□ 1
Pdx1P52946 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.33■■□□□ 1
Pdx1P52946 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pdx1P52946 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pdx1P52946 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdx1P52946 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdx1P52946 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdx1P52946 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pdx1P52946 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pdx1P52946 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.31■■□□□ 1
Pdx1P52946 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Pdx1P52946 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdx1P52946 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pdx1P52946 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdx1P52946 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Pdx1P52946 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pdx1P52946 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Pdx1P52946 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.3■■□□□ 1
Pdx1P52946 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdx1P52946 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.3■■□□□ 1
Pdx1P52946 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.29■■□□□ 1
Pdx1P52946 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.29■■□□□ 1
Pdx1P52946 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdx1P52946 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pdx1P52946 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pdx1P52946 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdx1P52946 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.28■■□□□ 1
Pdx1P52946 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdx1P52946 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pdx1P52946 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdx1P52946 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.27■■□□□ 1
Pdx1P52946 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdx1P52946 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms