Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx3P48381 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rfx3P48381 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.43■□□□□ 0.7
Rfx3P48381 Gm9806-201ENSMUST00000051080 552 ntBASIC19.43■□□□□ 0.7
Rfx3P48381 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx3P48381 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rfx3P48381 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx3P48381 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx3P48381 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx3P48381 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rfx3P48381 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx3P48381 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rfx3P48381 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx3P48381 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx3P48381 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rfx3P48381 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rfx3P48381 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.41■□□□□ 0.7
Rfx3P48381 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Gm16437-201ENSMUST00000025669 507 ntBASIC19.41■□□□□ 0.7
Rfx3P48381 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx3P48381 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx3P48381 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.4■□□□□ 0.7
Rfx3P48381 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx3P48381 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rfx3P48381 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx3P48381 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx3P48381 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx3P48381 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx3P48381 Gm44428-201ENSMUST00000204474 874 ntBASIC19.39■□□□□ 0.69
Rfx3P48381 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx3P48381 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.39■□□□□ 0.69
Rfx3P48381 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx3P48381 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.39■□□□□ 0.69
Rfx3P48381 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rfx3P48381 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.38■□□□□ 0.69
Rfx3P48381 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx3P48381 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx3P48381 Gm11687-201ENSMUST00000118911 886 ntBASIC19.37■□□□□ 0.69
Rfx3P48381 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfx3P48381 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfx3P48381 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx3P48381 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfx3P48381 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfx3P48381 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rfx3P48381 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx3P48381 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx3P48381 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx3P48381 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rfx3P48381 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx3P48381 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx3P48381 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfx3P48381 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx3P48381 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rfx3P48381 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Rfx3P48381 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rfx3P48381 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx3P48381 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx3P48381 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx3P48381 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx3P48381 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx3P48381 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx3P48381 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx3P48381 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx3P48381 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx3P48381 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx3P48381 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx3P48381 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx3P48381 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx3P48381 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx3P48381 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Rfx3P48381 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx3P48381 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rfx3P48381 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx3P48381 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx3P48381 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.31■□□□□ 0.68
Rfx3P48381 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rfx3P48381 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.3■□□□□ 0.68
Rfx3P48381 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx3P48381 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
Rfx3P48381 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.29■□□□□ 0.68
Rfx3P48381 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx3P48381 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.29■□□□□ 0.68
Rfx3P48381 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms