Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cxcl12P40224 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.74■■□□□ 1.23
Cxcl12P40224 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cxcl12P40224 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Cxcl12P40224 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cxcl12P40224 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.74■■□□□ 1.23
Cxcl12P40224 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cxcl12P40224 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cxcl12P40224 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cxcl12P40224 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.73■■□□□ 1.23
Cxcl12P40224 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cxcl12P40224 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cxcl12P40224 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cxcl12P40224 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.72■■□□□ 1.23
Cxcl12P40224 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 Gm18284-201ENSMUST00000172604 624 ntBASIC22.72■■□□□ 1.23
Cxcl12P40224 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Cxcl12P40224 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cxcl12P40224 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cxcl12P40224 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.71■■□□□ 1.23
Cxcl12P40224 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.71■■□□□ 1.23
Cxcl12P40224 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Cxcl12P40224 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cxcl12P40224 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cxcl12P40224 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cxcl12P40224 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cxcl12P40224 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cxcl12P40224 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.69■■□□□ 1.22
Cxcl12P40224 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cxcl12P40224 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.68■■□□□ 1.22
Cxcl12P40224 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Cxcl12P40224 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.68■■□□□ 1.22
Cxcl12P40224 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cxcl12P40224 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cxcl12P40224 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cxcl12P40224 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cxcl12P40224 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Cxcl12P40224 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cxcl12P40224 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cxcl12P40224 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.65■■□□□ 1.22
Cxcl12P40224 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cxcl12P40224 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cxcl12P40224 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cxcl12P40224 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.64■■□□□ 1.21
Cxcl12P40224 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cxcl12P40224 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cxcl12P40224 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.63■■□□□ 1.21
Cxcl12P40224 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cxcl12P40224 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.62■■□□□ 1.21
Cxcl12P40224 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Cxcl12P40224 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cxcl12P40224 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cxcl12P40224 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
Cxcl12P40224 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.61■■□□□ 1.21
Cxcl12P40224 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.61■■□□□ 1.21
Cxcl12P40224 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cxcl12P40224 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.61■■□□□ 1.21
Cxcl12P40224 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cxcl12P40224 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cxcl12P40224 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cxcl12P40224 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.6■■□□□ 1.21
Cxcl12P40224 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cxcl12P40224 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cxcl12P40224 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.6■■□□□ 1.21
Cxcl12P40224 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cxcl12P40224 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cxcl12P40224 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.59■■□□□ 1.21
Cxcl12P40224 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cxcl12P40224 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.58■■□□□ 1.21
Cxcl12P40224 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.57■■□□□ 1.2
Cxcl12P40224 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cxcl12P40224 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cxcl12P40224 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.57■■□□□ 1.2
Cxcl12P40224 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Cxcl12P40224 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms