Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd28P31041 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cd28P31041 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.97■□□□□ 0.63
Cd28P31041 Gm22567-201ENSMUST00000175542 342 ntBASIC18.97■□□□□ 0.63
Cd28P31041 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd28P31041 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd28P31041 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.97■□□□□ 0.63
Cd28P31041 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Cd28P31041 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.96■□□□□ 0.63
Cd28P31041 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd28P31041 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.96■□□□□ 0.63
Cd28P31041 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd28P31041 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd28P31041 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cd28P31041 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cd28P31041 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.94■□□□□ 0.62
Cd28P31041 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Cd28P31041 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cd28P31041 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd28P31041 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd28P31041 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Cd28P31041 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.93■□□□□ 0.62
Cd28P31041 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd28P31041 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd28P31041 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd28P31041 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cd28P31041 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd28P31041 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.91■□□□□ 0.62
Cd28P31041 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cd28P31041 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cd28P31041 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd28P31041 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd28P31041 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd28P31041 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd28P31041 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cd28P31041 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd28P31041 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cd28P31041 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cd28P31041 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cd28P31041 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd28P31041 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.89■□□□□ 0.61
Cd28P31041 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.89■□□□□ 0.61
Cd28P31041 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd28P31041 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cd28P31041 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
Cd28P31041 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.88■□□□□ 0.61
Cd28P31041 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.88■□□□□ 0.61
Cd28P31041 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.88■□□□□ 0.61
Cd28P31041 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Cd28P31041 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cd28P31041 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd28P31041 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd28P31041 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd28P31041 Gm6821-201ENSMUST00000107540 542 ntBASIC18.87■□□□□ 0.61
Cd28P31041 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.87■□□□□ 0.61
Cd28P31041 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.87■□□□□ 0.61
Cd28P31041 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.87■□□□□ 0.61
Cd28P31041 Gm4799-201ENSMUST00000095396 657 ntBASIC18.87■□□□□ 0.61
Cd28P31041 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd28P31041 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cd28P31041 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms