Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpbP27048 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SnrpbP27048 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.88■□□□□ 0.61
SnrpbP27048 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpbP27048 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SnrpbP27048 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SnrpbP27048 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.87■□□□□ 0.61
SnrpbP27048 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.87■□□□□ 0.61
SnrpbP27048 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SnrpbP27048 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SnrpbP27048 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SnrpbP27048 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SnrpbP27048 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SnrpbP27048 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
SnrpbP27048 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SnrpbP27048 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SnrpbP27048 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SnrpbP27048 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SnrpbP27048 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SnrpbP27048 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SnrpbP27048 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SnrpbP27048 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SnrpbP27048 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SnrpbP27048 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SnrpbP27048 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SnrpbP27048 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.84■□□□□ 0.61
SnrpbP27048 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SnrpbP27048 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SnrpbP27048 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SnrpbP27048 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SnrpbP27048 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SnrpbP27048 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SnrpbP27048 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SnrpbP27048 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.82■□□□□ 0.6
SnrpbP27048 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SnrpbP27048 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SnrpbP27048 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.81■□□□□ 0.6
SnrpbP27048 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SnrpbP27048 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SnrpbP27048 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SnrpbP27048 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SnrpbP27048 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SnrpbP27048 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.8■□□□□ 0.6
SnrpbP27048 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SnrpbP27048 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SnrpbP27048 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SnrpbP27048 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.79■□□□□ 0.6
SnrpbP27048 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SnrpbP27048 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SnrpbP27048 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SnrpbP27048 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.78■□□□□ 0.6
SnrpbP27048 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
SnrpbP27048 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SnrpbP27048 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SnrpbP27048 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.77■□□□□ 0.6
SnrpbP27048 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SnrpbP27048 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SnrpbP27048 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.77■□□□□ 0.6
SnrpbP27048 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SnrpbP27048 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SnrpbP27048 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SnrpbP27048 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SnrpbP27048 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SnrpbP27048 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SnrpbP27048 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SnrpbP27048 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms