Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cd48P18181 Gm44428-201ENSMUST00000204474 874 ntBASIC19.3■□□□□ 0.68
Cd48P18181 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd48P18181 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd48P18181 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cd48P18181 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd48P18181 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cd48P18181 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Cd48P18181 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cd48P18181 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd48P18181 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cd48P18181 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd48P18181 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cd48P18181 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd48P18181 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cd48P18181 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd48P18181 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd48P18181 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd48P18181 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd48P18181 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cd48P18181 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cd48P18181 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cd48P18181 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd48P18181 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cd48P18181 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.26■□□□□ 0.67
Cd48P18181 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.26■□□□□ 0.67
Cd48P18181 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd48P18181 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd48P18181 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd48P18181 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd48P18181 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd48P18181 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd48P18181 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd48P18181 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.25■□□□□ 0.67
Cd48P18181 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd48P18181 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd48P18181 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd48P18181 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.24■□□□□ 0.67
Cd48P18181 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cd48P18181 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd48P18181 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd48P18181 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd48P18181 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd48P18181 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd48P18181 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd48P18181 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd48P18181 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cd48P18181 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cd48P18181 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd48P18181 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cd48P18181 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd48P18181 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.21■□□□□ 0.67
Cd48P18181 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd48P18181 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd48P18181 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd48P18181 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd48P18181 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.2■□□□□ 0.66
Cd48P18181 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cd48P18181 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Cd48P18181 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Cd48P18181 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd48P18181 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd48P18181 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd48P18181 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd48P18181 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd48P18181 Gm9806-201ENSMUST00000051080 552 ntBASIC19.19■□□□□ 0.66
Cd48P18181 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cd48P18181 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd48P18181 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd48P18181 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cd48P18181 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd48P18181 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cd48P18181 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd48P18181 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cd48P18181 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cd48P18181 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cd48P18181 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd48P18181 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd48P18181 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd48P18181 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cd48P18181 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms