Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ApoeP08226 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ApoeP08226 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ApoeP08226 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.41■□□□□ 0.86
ApoeP08226 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ApoeP08226 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ApoeP08226 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ApoeP08226 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ApoeP08226 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.4■□□□□ 0.86
ApoeP08226 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.4■□□□□ 0.86
ApoeP08226 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.4■□□□□ 0.86
ApoeP08226 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ApoeP08226 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ApoeP08226 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.39■□□□□ 0.85
ApoeP08226 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
ApoeP08226 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ApoeP08226 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.39■□□□□ 0.85
ApoeP08226 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ApoeP08226 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ApoeP08226 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ApoeP08226 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ApoeP08226 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.38■□□□□ 0.85
ApoeP08226 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ApoeP08226 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ApoeP08226 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ApoeP08226 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ApoeP08226 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ApoeP08226 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ApoeP08226 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.37■□□□□ 0.85
ApoeP08226 Terc-201ENSMUST00000082862 423 ntBASIC20.37■□□□□ 0.85
ApoeP08226 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.37■□□□□ 0.85
ApoeP08226 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ApoeP08226 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ApoeP08226 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ApoeP08226 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ApoeP08226 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ApoeP08226 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.36■□□□□ 0.85
ApoeP08226 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ApoeP08226 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ApoeP08226 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.36■□□□□ 0.85
ApoeP08226 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ApoeP08226 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ApoeP08226 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.35■□□□□ 0.85
ApoeP08226 Gm6821-201ENSMUST00000107540 542 ntBASIC20.35■□□□□ 0.85
ApoeP08226 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ApoeP08226 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ApoeP08226 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ApoeP08226 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ApoeP08226 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ApoeP08226 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ApoeP08226 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
ApoeP08226 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ApoeP08226 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ApoeP08226 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.33■□□□□ 0.85
ApoeP08226 Mir3960-201ENSMUST00000198213 73 ntBASIC20.33■□□□□ 0.85
ApoeP08226 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ApoeP08226 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ApoeP08226 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ApoeP08226 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ApoeP08226 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ApoeP08226 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ApoeP08226 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ApoeP08226 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.31■□□□□ 0.84
ApoeP08226 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ApoeP08226 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ApoeP08226 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ApoeP08226 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ApoeP08226 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ApoeP08226 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ApoeP08226 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ApoeP08226 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ApoeP08226 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.3■□□□□ 0.84
ApoeP08226 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.3■□□□□ 0.84
ApoeP08226 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.3■□□□□ 0.84
ApoeP08226 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ApoeP08226 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ApoeP08226 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ApoeP08226 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.29■□□□□ 0.84
ApoeP08226 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ApoeP08226 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ApoeP08226 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ApoeP08226 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ApoeP08226 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ApoeP08226 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms