Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igh-VJ558P01758 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Igh-VJ558P01758 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igh-VJ558P01758 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Igh-VJ558P01758 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igh-VJ558P01758 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igh-VJ558P01758 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.79■□□□□ 0.6
Igh-VJ558P01758 Mir6538-201ENSMUST00000183713 110 ntBASIC18.79■□□□□ 0.6
Igh-VJ558P01758 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igh-VJ558P01758 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Igh-VJ558P01758 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igh-VJ558P01758 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Gm7332-201ENSMUST00000118351 454 ntBASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.78■□□□□ 0.6
Igh-VJ558P01758 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Igh-VJ558P01758 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igh-VJ558P01758 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igh-VJ558P01758 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Gm12366-201ENSMUST00000121722 873 ntBASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Gm5786-201ENSMUST00000085368 882 ntBASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Igh-VJ558P01758 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Igh-VJ558P01758 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igh-VJ558P01758 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igh-VJ558P01758 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igh-VJ558P01758 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Igh-VJ558P01758 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Igh-VJ558P01758 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Igh-VJ558P01758 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igh-VJ558P01758 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igh-VJ558P01758 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.7■□□□□ 0.58
Igh-VJ558P01758 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igh-VJ558P01758 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Igh-VJ558P01758 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Igh-VJ558P01758 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms