Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cops4O88544 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops4O88544 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops4O88544 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.86■□□□□ 0.77
Cops4O88544 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops4O88544 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cops4O88544 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops4O88544 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops4O88544 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops4O88544 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops4O88544 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops4O88544 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops4O88544 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Cops4O88544 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cops4O88544 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.84■□□□□ 0.77
Cops4O88544 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops4O88544 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops4O88544 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops4O88544 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops4O88544 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops4O88544 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops4O88544 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops4O88544 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cops4O88544 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cops4O88544 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops4O88544 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.83■□□□□ 0.76
Cops4O88544 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cops4O88544 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops4O88544 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cops4O88544 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops4O88544 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.82■□□□□ 0.76
Cops4O88544 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops4O88544 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cops4O88544 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cops4O88544 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops4O88544 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cops4O88544 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops4O88544 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops4O88544 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops4O88544 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops4O88544 Gm22567-201ENSMUST00000175542 342 ntBASIC19.79■□□□□ 0.76
Cops4O88544 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.79■□□□□ 0.76
Cops4O88544 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cops4O88544 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops4O88544 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops4O88544 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops4O88544 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cops4O88544 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.78■□□□□ 0.76
Cops4O88544 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops4O88544 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops4O88544 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops4O88544 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cops4O88544 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops4O88544 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops4O88544 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops4O88544 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.77■□□□□ 0.76
Cops4O88544 Gm4799-201ENSMUST00000095396 657 ntBASIC19.77■□□□□ 0.76
Cops4O88544 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cops4O88544 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops4O88544 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops4O88544 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops4O88544 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cops4O88544 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cops4O88544 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.76■□□□□ 0.75
Cops4O88544 Gm7432-201ENSMUST00000210343 879 ntBASIC19.76■□□□□ 0.75
Cops4O88544 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.76■□□□□ 0.75
Cops4O88544 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops4O88544 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cops4O88544 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cops4O88544 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cops4O88544 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.75■□□□□ 0.75
Cops4O88544 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cops4O88544 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops4O88544 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops4O88544 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops4O88544 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops4O88544 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops4O88544 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops4O88544 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.73■□□□□ 0.75
Cops4O88544 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.73■□□□□ 0.75
Cops4O88544 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cops4O88544 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops4O88544 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.73■□□□□ 0.75
Cops4O88544 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cops4O88544 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.72■□□□□ 0.75
Cops4O88544 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops4O88544 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms