Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pdlim3O70209 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pdlim3O70209 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pdlim3O70209 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim3O70209 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim3O70209 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pdlim3O70209 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim3O70209 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.55■□□□□ 0.72
Pdlim3O70209 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim3O70209 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim3O70209 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim3O70209 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim3O70209 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim3O70209 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pdlim3O70209 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.54■□□□□ 0.72
Pdlim3O70209 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdlim3O70209 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim3O70209 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.53■□□□□ 0.72
Pdlim3O70209 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim3O70209 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim3O70209 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim3O70209 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim3O70209 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim3O70209 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim3O70209 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pdlim3O70209 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim3O70209 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pdlim3O70209 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.52■□□□□ 0.71
Pdlim3O70209 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pdlim3O70209 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pdlim3O70209 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.51■□□□□ 0.71
Pdlim3O70209 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim3O70209 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim3O70209 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim3O70209 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pdlim3O70209 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.5■□□□□ 0.71
Pdlim3O70209 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim3O70209 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim3O70209 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim3O70209 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim3O70209 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim3O70209 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim3O70209 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.49■□□□□ 0.71
Pdlim3O70209 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pdlim3O70209 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim3O70209 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Pdlim3O70209 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim3O70209 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim3O70209 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim3O70209 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pdlim3O70209 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim3O70209 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.48■□□□□ 0.71
Pdlim3O70209 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pdlim3O70209 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pdlim3O70209 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim3O70209 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim3O70209 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pdlim3O70209 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim3O70209 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pdlim3O70209 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim3O70209 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim3O70209 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim3O70209 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim3O70209 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.46■□□□□ 0.71
Pdlim3O70209 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim3O70209 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Pdlim3O70209 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
Pdlim3O70209 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim3O70209 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim3O70209 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pdlim3O70209 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim3O70209 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim3O70209 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pdlim3O70209 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pdlim3O70209 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pdlim3O70209 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim3O70209 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pdlim3O70209 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.43■□□□□ 0.7
Pdlim3O70209 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms