Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh5O55240 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Rdh5O55240 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh5O55240 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rdh5O55240 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.45■□□□□ 0.86
Rdh5O55240 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh5O55240 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh5O55240 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rdh5O55240 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh5O55240 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rdh5O55240 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.42■□□□□ 0.86
Rdh5O55240 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh5O55240 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.41■□□□□ 0.86
Rdh5O55240 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.41■□□□□ 0.86
Rdh5O55240 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh5O55240 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rdh5O55240 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh5O55240 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rdh5O55240 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh5O55240 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rdh5O55240 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh5O55240 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh5O55240 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh5O55240 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh5O55240 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh5O55240 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rdh5O55240 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh5O55240 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rdh5O55240 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh5O55240 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh5O55240 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh5O55240 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh5O55240 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh5O55240 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.37■□□□□ 0.85
Rdh5O55240 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rdh5O55240 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rdh5O55240 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.37■□□□□ 0.85
Rdh5O55240 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh5O55240 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rdh5O55240 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh5O55240 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh5O55240 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh5O55240 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh5O55240 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.35■□□□□ 0.85
Rdh5O55240 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh5O55240 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh5O55240 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh5O55240 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh5O55240 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.34■□□□□ 0.85
Rdh5O55240 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh5O55240 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rdh5O55240 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh5O55240 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh5O55240 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh5O55240 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh5O55240 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh5O55240 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.32■□□□□ 0.84
Rdh5O55240 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh5O55240 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rdh5O55240 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms