Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Ptch2O35595 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch2O35595 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch2O35595 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.2■■□□□ 1.14
Ptch2O35595 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.2■■□□□ 1.14
Ptch2O35595 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch2O35595 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.19■■□□□ 1.14
Ptch2O35595 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch2O35595 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch2O35595 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.18■■□□□ 1.14
Ptch2O35595 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ptch2O35595 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ptch2O35595 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch2O35595 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.17■■□□□ 1.14
Ptch2O35595 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Ptch2O35595 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch2O35595 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch2O35595 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch2O35595 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.16■■□□□ 1.14
Ptch2O35595 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch2O35595 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.16■■□□□ 1.14
Ptch2O35595 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.16■■□□□ 1.14
Ptch2O35595 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch2O35595 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch2O35595 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch2O35595 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch2O35595 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch2O35595 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Ptch2O35595 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Ptch2O35595 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch2O35595 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch2O35595 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.14■■□□□ 1.13
Ptch2O35595 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.14■■□□□ 1.13
Ptch2O35595 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.14■■□□□ 1.13
Ptch2O35595 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.14■■□□□ 1.13
Ptch2O35595 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch2O35595 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch2O35595 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.13■■□□□ 1.13
Ptch2O35595 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch2O35595 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch2O35595 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch2O35595 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch2O35595 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ptch2O35595 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.12■■□□□ 1.13
Ptch2O35595 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch2O35595 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ptch2O35595 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch2O35595 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.11■■□□□ 1.13
Ptch2O35595 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch2O35595 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch2O35595 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch2O35595 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.09■■□□□ 1.13
Ptch2O35595 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Ptch2O35595 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.09■■□□□ 1.13
Ptch2O35595 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.09■■□□□ 1.13
Ptch2O35595 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Ptch2O35595 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch2O35595 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.08■■□□□ 1.13
Ptch2O35595 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Ptch2O35595 Gm7417-201ENSMUST00000192950 473 ntBASIC22.08■■□□□ 1.13
Ptch2O35595 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.08■■□□□ 1.13
Ptch2O35595 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ptch2O35595 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ptch2O35595 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.07■■□□□ 1.12
Ptch2O35595 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.07■■□□□ 1.12
Ptch2O35595 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.07■■□□□ 1.12
Ptch2O35595 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Ptch2O35595 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch2O35595 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.06■■□□□ 1.12
Ptch2O35595 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ptch2O35595 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch2O35595 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms