Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.18■■□□□ 1.14
Ercc2O08811 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ercc2O08811 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ercc2O08811 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.17■■□□□ 1.14
Ercc2O08811 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Ercc2O08811 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ercc2O08811 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.16■■□□□ 1.14
Ercc2O08811 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ercc2O08811 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ercc2O08811 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ercc2O08811 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ercc2O08811 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ercc2O08811 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ercc2O08811 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.14■■□□□ 1.14
Ercc2O08811 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ercc2O08811 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
Ercc2O08811 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ercc2O08811 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ercc2O08811 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ercc2O08811 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.14■■□□□ 1.13
Ercc2O08811 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ercc2O08811 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ercc2O08811 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ercc2O08811 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ercc2O08811 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ercc2O08811 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ercc2O08811 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ercc2O08811 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ercc2O08811 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ercc2O08811 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.11■■□□□ 1.13
Ercc2O08811 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ercc2O08811 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ercc2O08811 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ercc2O08811 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Ercc2O08811 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.1■■□□□ 1.13
Ercc2O08811 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ercc2O08811 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ercc2O08811 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ercc2O08811 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ercc2O08811 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.09■■□□□ 1.13
Ercc2O08811 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ercc2O08811 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Ercc2O08811 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Ercc2O08811 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.08■■□□□ 1.13
Ercc2O08811 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.08■■□□□ 1.13
Ercc2O08811 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ercc2O08811 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Ercc2O08811 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ercc2O08811 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.07■■□□□ 1.12
Ercc2O08811 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ercc2O08811 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ercc2O08811 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ercc2O08811 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ercc2O08811 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ercc2O08811 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ercc2O08811 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ercc2O08811 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ercc2O08811 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Ercc2O08811 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ercc2O08811 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.06■■□□□ 1.12
Ercc2O08811 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ercc2O08811 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ercc2O08811 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ercc2O08811 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ercc2O08811 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.05■■□□□ 1.12
Ercc2O08811 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ercc2O08811 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.05■■□□□ 1.12
Ercc2O08811 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.05■■□□□ 1.12
Ercc2O08811 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ercc2O08811 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ercc2O08811 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.05■■□□□ 1.12
Ercc2O08811 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.05■■□□□ 1.12
Ercc2O08811 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.05■■□□□ 1.12
Ercc2O08811 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Ercc2O08811 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Ercc2O08811 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ercc2O08811 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.04■■□□□ 1.12
Ercc2O08811 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ercc2O08811 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ercc2O08811 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ercc2O08811 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ercc2O08811 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.03■■□□□ 1.12
Ercc2O08811 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ercc2O08811 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ercc2O08811 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms