Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12887B1AVM1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12887B1AVM1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm12887B1AVM1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12887B1AVM1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gm12887B1AVM1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12887B1AVM1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12887B1AVM1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12887B1AVM1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gm12887B1AVM1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12887B1AVM1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.39■□□□□ 0.38
Gm12887B1AVM1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12887B1AVM1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm12887B1AVM1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm12887B1AVM1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm12887B1AVM1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm12887B1AVM1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm12887B1AVM1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms