Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Krt28A6BLY7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Krt28A6BLY7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.4■■□□□ 1.5
Krt28A6BLY7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Krt28A6BLY7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Krt28A6BLY7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Krt28A6BLY7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.39■■□□□ 1.5
Krt28A6BLY7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.39■■□□□ 1.49
Krt28A6BLY7 Gm8495-201ENSMUST00000188740 694 ntBASIC24.39■■□□□ 1.49
Krt28A6BLY7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Krt28A6BLY7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Krt28A6BLY7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.38■■□□□ 1.49
Krt28A6BLY7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.38■■□□□ 1.49
Krt28A6BLY7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Krt28A6BLY7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Krt28A6BLY7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.37■■□□□ 1.49
Krt28A6BLY7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Krt28A6BLY7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Krt28A6BLY7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Krt28A6BLY7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Krt28A6BLY7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.35■■□□□ 1.49
Krt28A6BLY7 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.35■■□□□ 1.49
Krt28A6BLY7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.35■■□□□ 1.49
Krt28A6BLY7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Krt28A6BLY7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.34■■□□□ 1.49
Krt28A6BLY7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.34■■□□□ 1.49
Krt28A6BLY7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Krt28A6BLY7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.34■■□□□ 1.49
Krt28A6BLY7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Krt28A6BLY7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Krt28A6BLY7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Krt28A6BLY7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.33■■□□□ 1.49
Krt28A6BLY7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.33■■□□□ 1.48
Krt28A6BLY7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Krt28A6BLY7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Krt28A6BLY7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Krt28A6BLY7 Gm18284-201ENSMUST00000172604 624 ntBASIC24.3■■□□□ 1.48
Krt28A6BLY7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Krt28A6BLY7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Krt28A6BLY7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Krt28A6BLY7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Krt28A6BLY7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Krt28A6BLY7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Krt28A6BLY7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Krt28A6BLY7 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.29■■□□□ 1.48
Krt28A6BLY7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Krt28A6BLY7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Krt28A6BLY7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Krt28A6BLY7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Krt28A6BLY7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Krt28A6BLY7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.26■■□□□ 1.47
Krt28A6BLY7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
Krt28A6BLY7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.26■■□□□ 1.47
Krt28A6BLY7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Krt28A6BLY7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Krt28A6BLY7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Krt28A6BLY7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Krt28A6BLY7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
Krt28A6BLY7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Krt28A6BLY7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Krt28A6BLY7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Krt28A6BLY7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.23■■□□□ 1.47
Krt28A6BLY7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Krt28A6BLY7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Krt28A6BLY7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Krt28A6BLY7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Krt28A6BLY7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Krt28A6BLY7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms