Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav21-dv12A0A075B6C4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav21-dv12A0A075B6C4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav21-dv12A0A075B6C4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav21-dv12A0A075B6C4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav21-dv12A0A075B6C4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm22567-201ENSMUST00000175542 342 ntBASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav21-dv12A0A075B6C4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav21-dv12A0A075B6C4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav21-dv12A0A075B6C4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav21-dv12A0A075B6C4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav21-dv12A0A075B6C4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav21-dv12A0A075B6C4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav21-dv12A0A075B6C4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms