Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trav6n-7A0A075B6A6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6n-7A0A075B6A6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Trav6n-7A0A075B6A6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6n-7A0A075B6A6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6n-7A0A075B6A6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6n-7A0A075B6A6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav6n-7A0A075B6A6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6n-7A0A075B6A6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.28■□□□□ 0.52
Trav6n-7A0A075B6A6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6n-7A0A075B6A6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6n-7A0A075B6A6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav6n-7A0A075B6A6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6n-7A0A075B6A6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav6n-7A0A075B6A6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6n-7A0A075B6A6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-7A0A075B6A6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-7A0A075B6A6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-7A0A075B6A6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-7A0A075B6A6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6n-7A0A075B6A6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6n-7A0A075B6A6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Gm5921-201ENSMUST00000075898 882 ntBASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6n-7A0A075B6A6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms