Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-3A0A075B648 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.84■□□□□ 0.13
Trav12-3A0A075B648 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav12-3A0A075B648 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-3A0A075B648 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-3A0A075B648 Golph3-202ENSMUST00000226517 2359 ntBASIC15.83■□□□□ 0.12
Trav12-3A0A075B648 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-3A0A075B648 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-3A0A075B648 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav12-3A0A075B648 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-3A0A075B648 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-3A0A075B648 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav12-3A0A075B648 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-3A0A075B648 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav12-3A0A075B648 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-3A0A075B648 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-3A0A075B648 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-3A0A075B648 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-3A0A075B648 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-3A0A075B648 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-3A0A075B648 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-3A0A075B648 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-3A0A075B648 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-3A0A075B648 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-3A0A075B648 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-3A0A075B648 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trav12-3A0A075B648 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav12-3A0A075B648 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12-3A0A075B648 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12-3A0A075B648 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Gm30023-201ENSMUST00000197970 889 ntBASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12-3A0A075B648 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav12-3A0A075B648 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12-3A0A075B648 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 174.5 ms