Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Gm2272-201ENSMUST00000194903 582 ntBASIC10.53□□□□□ -0.72
PdfS4R2K0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.53□□□□□ -0.72
PdfS4R2K0 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.53□□□□□ -0.72
PdfS4R2K0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.53□□□□□ -0.72
PdfS4R2K0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PdfS4R2K0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
PdfS4R2K0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
PdfS4R2K0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.52□□□□□ -0.72
PdfS4R2K0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PdfS4R2K0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
PdfS4R2K0 Pck2-205ENSMUST00000226352 2784 ntBASIC10.52□□□□□ -0.73
PdfS4R2K0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm11594-201ENSMUST00000122313 162 ntBASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm11025-201ENSMUST00000140773 466 ntBASIC10.52□□□□□ -0.73
PdfS4R2K0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
PdfS4R2K0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.52□□□□□ -0.73
PdfS4R2K0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.52□□□□□ -0.73
PdfS4R2K0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PdfS4R2K0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PdfS4R2K0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
PdfS4R2K0 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms