Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3aQ9JKX8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gm18624-201ENSMUST00000220966 658 ntBASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3aQ9JKX8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3aQ9JKX8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms