Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm27838-201ENSMUST00000184829 128 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm2423-201ENSMUST00000074863 733 ntBASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tubb3Q9ERD7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tubb3Q9ERD7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubb3Q9ERD7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms