Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Gm11452-201ENSMUST00000122376 690 ntBASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Gm10060-201ENSMUST00000212002 111 ntBASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 AV026068-213ENSMUST00000223675 1171 ntBASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmgn3Q9DCB1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgn3Q9DCB1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Gm13884-201ENSMUST00000118103 829 ntBASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Gm4899-201ENSMUST00000178708 719 ntBASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgn3Q9DCB1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms