Protein–RNA interactions for Protein: Q9DA69

Ift43, Intraflagellar transport protein 43 homolog, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift43Q9DA69 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.63□□□□□ -0.23
Ift43Q9DA69 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ift43Q9DA69 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm13226-201ENSMUST00000117838 404 ntBASIC13.62□□□□□ -0.23
Ift43Q9DA69 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.62□□□□□ -0.23
Ift43Q9DA69 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.62□□□□□ -0.23
Ift43Q9DA69 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.62□□□□□ -0.23
Ift43Q9DA69 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ift43Q9DA69 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm15376-201ENSMUST00000122258 783 ntBASIC13.61□□□□□ -0.23
Ift43Q9DA69 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm45784-201ENSMUST00000188360 142 ntBASIC13.61□□□□□ -0.23
Ift43Q9DA69 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.61□□□□□ -0.23
Ift43Q9DA69 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.61□□□□□ -0.23
Ift43Q9DA69 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ift43Q9DA69 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ift43Q9DA69 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms